Hotels in South Setauket

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Where to stay in South Setauket?

Properties are selected based on real traveler reviews and popularity among guests who’ve booked a night in South Setauket on Hotels.com. These South Setauket hotels consistently deliver on quality, location and traveler experience. Last updated on September 16, 2026.

1. Holiday Inn Express Stony Brook by IHG

Centereach

CNY821

CNY938 total

includes taxes & fees

Oct 4 - Oct 5

2. Hilton Garden Inn Stony Brook

Stony Brook

CNY964

CNY1,101 total

includes taxes & fees

Oct 5 - Oct 6

Indoor pool, open 5:30 AM to 11:00 PM, sun loungers

3. Hampton Inn Long Island-Brookhaven

Farmingville

CNY820

CNY937 total

includes taxes & fees

Sep 20 - Sep 21

4. Holiday Inn Long Island-Islip Arpt East by IHG

Holtsville

CNY792

CNY905 total

includes taxes & fees

Oct 4 - Oct 5

5. Homewood Suites by Hilton Ronkonkoma

Ronkonkoma

CNY1,040

CNY1,188 total

includes taxes & fees

Sep 20 - Sep 21

Desk, laptop workspace, iron/ironing board, cribs (free)

6. Courtyard by Marriott Long Island MacArthur Airport

Ronkonkoma

CNY1,067

CNY1,219 total

includes taxes & fees

Sep 17 - Sep 18

7. Danfords Hotel and Marina

Port Jefferson

CNY1,130

CNY1,554 total

includes taxes & fees

Oct 15 - Oct 16

Indoor pool, open 7:00 AM to 10:00 PM, sun loungers

8. Home2 Suites by Hilton Long Island Brookhaven

Yaphank

CNY970

CNY1,108 total

includes taxes & fees

Oct 5 - Oct 6

Coffee/tea maker, fridge, microwave, oven

9. Residence Inn by Marriott Long Island Holtsville

Holtsville

CNY907

CNY1,036 total

includes taxes & fees

Sep 24 - Sep 25

Premium bedding, down comforters, desk, laptop workspace

10. Fairfield Inn by Marriott Medford Long Island

Medford

CNY809

CNY925 total

includes taxes & fees

Oct 6 - Oct 7

1 King 1 Bedroom Suite Sofa Bed | In-room safe, desk, laptop workspace, blackout drapes

11. Holiday Inn Express Hauppauge-Long Island

Hauppauge

CNY875

CNY1,000 total

includes taxes & fees

Sep 20 - Sep 21

Premium bedding, desk, laptop workspace, blackout drapes

12. Residence Inn By Marriott Long Island Hauppauge

Hauppauge

CNY1,020

CNY1,189 total

includes taxes & fees

Oct 4 - Oct 5

1 Queen Bed Non-Smoking | Premium bedding, desk, laptop workspace, blackout drapes

13. Hampton Inn Long Island/Islandia

Islandia

CNY827

CNY945 total

includes taxes & fees

Oct 7 - Oct 8

Standard Room, 1 King Bed, Non Smoking | Desk, blackout drapes, iron/ironing board, cribs (free)

14. Comfort Inn Medford - Long Island

Medford

CNY715

CNY816 total

includes taxes & fees

Oct 4 - Oct 5

Indoor pool, seasonal outdoor pool, pool umbrellas, sun loungers

Daily cooked-to-order breakfast for a fee

15. Hyatt Regency Long Island

Hauppauge

CNY964

CNY1,101 total

includes taxes & fees

Oct 4 - Oct 5

Desk, iron/ironing board, WiFi (free), bed sheets

16. Courtyard by Marriott Long Island Islip/Courthouse Complex

Central Islip

CNY966

CNY1,104 total

includes taxes & fees

Sep 20 - Sep 21

17. Hilton Garden Inn Islip/MacArthur Airport

Ronkonkoma

CNY793

CNY906 total

includes taxes & fees

Oct 12 - Oct 13

18. La Quinta Inn & Suites by Wyndham Islip - MacArthur Airport

Bohemia

CNY617

CNY705 total

includes taxes & fees

Oct 5 - Oct 6

Suite, 1 Bedroom | Desk, iron/ironing board, cribs (free), WiFi (free)

19. Residence Inn Long Island Islip/Courthouse Complex

Central Islip

CNY997

CNY1,139 total

includes taxes & fees

Sep 21 - Sep 22

Deluxe Single Room | Desk, WiFi (free), bed sheets

20. Midway Motel

Patchogue

CNY1,342

CNY1,533 total

includes taxes & fees

Sep 17 - Sep 18

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Go beyond your typical stay in South Setauket

Pet friendly

Apartment

Pool

Family friendly

Spa

Cottage

Check out reviews of South Setauket hotels guests love

Quality Suites Stratford

10/10 Excellent

"."

Clarion Hotel & Conference Center Ronkonkoma MacArthur Airport

10/10 Excellent

"Great location"

Hampton Inn Long Island-Brookhaven

10/10 Excellent

"Great quiet location and everything you would expect from a Hilton property"

Danfords Hotel and Marina

10/10 Excellent

"Love where is located. Very peaceful and calm"

The Circle Hotel Fairfield

10/10 Excellent

"Comfortable beds, quiet, very good breakfast"

Holiday Inn Express Stony Brook by IHG

8/10 Good

"Have to update the outlet for the new iPhones. All the chargers have the USB plug."

Hampton Inn Long Island/Islandia

10/10 Excellent

"Good"

Frequently asked questions

How much does a hotel room cost in South Setauket?

You can find top hotels in South Setauket from CNY705 with options to suit your budget and needs. If you're after an affordable hotel in South Setauket that meets all of your requirements, set your filters and then sort the results by "Price: low to high".

How can I find deals and earn rewards at South Setauket hotels?

Discover great deals on South Setauket hotel stays with Hotels.com. It's also a good idea to look at hotel prices mid-week or during the low season as you're likely to find off-peak deals. If you're up for a spontaneous trip, don't forget to check out our last-minute deals on South Setauket hotels.

Can I book South Setauket hotels with free cancellation?

To book a refundable South Setauket hotel on Hotels.com, just filter hotels by "Property cancellation options" and select "Fully refundable property". Many hotels offer free cancellation, so you can receive a refund if you need to cancel. Some hotels do require cancelling more than 24 hours before check-in, so double-check your booking beforehand.

What are some popular hotels in central South Setauket?

If you're looking for hotels in central South Setauket, check out Danfords Hotel and Marina and Hilton Garden Inn Stony Brook. Travelers love Danfords Hotel and Marina for its location, as well as the restaurant, bar/lounge and spa services this hotel offers. Hilton Garden Inn Stony Brook is another popular central hotel with an indoor pool, a restaurant and a bar/lounge.

What accommodations do travelers recommend in South Setauket?

Guests like Holiday Inn Express Hauppauge-Long Island, Clarion Hotel & Conference Center Ronkonkoma MacArthur Airport and Hampton Inn Long Island-Brookhaven.

Can I book a refundable hotel in South Setauket?

If you're looking for the flexibility to change your plans to South Setauket, most properties provide refundable* bookable rates. You can see these accommodations by searching our site and using the "fully refundable" filter to narrow down the results.

What will the weather in South Setauket be like during my visit?

July and August are typically the warmest months in South Setauket when the average temp is 72°F. January and February are the coldest months when the average temperature is 37°F. October and December are the months with the most rain.

Why should I book my South Setauket hotel through Hotels.com?

There are plenty of reasons to book your South Setauket travel with us: our free cancellations on selected hotels gives you the flexibility you're looking for, and with One Key™, our rewards program, you will be able to earn and use OneKeyCash™* on all eligible bookings such as hotels, car rentals, flights, vacation rentals and more on Hotels.com, Expedia and Vrbo.

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