Hotels in Waterloo

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Top 5 hotels in Waterloo at a glance

The Goose Crown Inn of Stoughton — 3-star hotel in Stoughton.
Best Western Watertown — 2.5-star hotel in Watertown. Guest rating: 9.0/10 — Wonderful.
Comfort Suites Johnson Creek Conference Center — 2.5-star hotel in Johnson Creek. Guest rating: 8.2/10 — Very Good.
Comfort Suites Cottage Grove – Madison — 2.5-star hotel in Village of Cottage Grove. Guest rating: 9.6/10 — Exceptional.
AmericInn by Wyndham Columbus Wisconsin — 2-star hotel in Columbus. Guest rating: 8.4/10 — Very Good.

Where to stay in Waterloo?

Properties are selected based on real traveler reviews and popularity among guests who’ve booked a night in Waterloo on Hotels.com. These Waterloo hotels consistently deliver on comfort, location and traveler experience. Last updated on August 13, 2026.

Deluxe Suite, 1 Bedroom, Garden View | In-room safe, blackout drapes, WiFi (free)

Superior Double Room, 1 Queen Bed, City View | Game room

Deluxe Suite, 1 Bedroom, Garden View | Living area

The Goose Crown Inn of Stoughton

Stoughton

Standard Room, 1 King Bed, Accessible, Jetted Tub | Hypo-allergenic bedding available, in-room safe, desk, laptop workspace

Best Western Watertown

Watertown

CNY647

CNY734 total

includes taxes & fees

Aug 16 - Aug 17

Comfort Suites Johnson Creek Conference Center

Johnson Creek

CNY579

CNY657 total

includes taxes & fees

Aug 20 - Aug 21

Premium bedding, desk, laptop workspace, iron/ironing board

Comfort Suites Cottage Grove – Madison

Village of Cottage Grove

CNY814

CNY923 total

includes taxes & fees

Sep 6 - Sep 7

Premier Room, 2 Queen Beds, Non Smoking | Desk, laptop workspace, blackout drapes, iron/ironing board

AmericInn by Wyndham Columbus Wisconsin

Columbus

CNY662

CNY738 total

includes taxes & fees

Aug 23 - Aug 24

Days Inn by Wyndham Johnson Creek

Johnson Creek

CNY475

CNY501 total

includes taxes & fees

Aug 16 - Aug 17

Deluxe Suite, Multiple Beds, Non Smoking | Jetted tub

AmericInn by Wyndham Lake Mills

Lake Mills

CNY540

CNY570 total

includes taxes & fees

Aug 31 - Sep 1

Standard Room, 2 Queen Beds, Non Smoking, Refrigerator & Microwave | Desk, laptop workspace, iron/ironing board, cribs (free)

Best Western Plus Jefferson

Jefferson

CNY729

CNY805 total

includes taxes & fees

Aug 18 - Aug 19

Indoor pool, open 6:00 AM to 11:00 PM, sun loungers

Holiday Inn Express & Suites Madison by IHG

Madison

CNY830

CNY958 total

includes taxes & fees

Sep 13 - Sep 14

32-inch flat-screen TV with digital channels, TV

Americana Suite | Hypo-allergenic bedding available, pillowtop beds, laptop workspace

The Katherine Holle House

Watertown

CNY799

CNY920 total

includes taxes & fees

Aug 16 - Aug 17

Suite, 1 King Bed, Non Smoking | Laptop workspace, iron/ironing board, WiFi (free), alarm clocks

Quality Inn & Suites Sun Prairie Madison East

Sun Prairie

CNY468

CNY527 total

includes taxes & fees

Sep 13 - Sep 14

Country Inn & Suites by Radisson, Ft. Atkinson, WI

Fort Atkinson

CNY753

CNY832 total

includes taxes & fees

Aug 23 - Aug 24

Premium bedding, desk, blackout drapes, iron/ironing board

Hampton Inn Madison East Towne Mall Area

Greater Sandburg

CNY688

CNY795 total

includes taxes & fees

Aug 27 - Aug 28

Hilton Garden Inn Madison Sun Prairie

Sun Prairie

CNY1,101

CNY1,238 total

includes taxes & fees

Aug 27 - Aug 28

Studio Suite, 1 King Bed, Non Smoking | Iron/ironing board, cribs (free), WiFi (free), bed sheets

Suite, 1 King Bed, Non Smoking (1 Bedroom) | Iron/ironing board, cribs (free), WiFi (free), bed sheets

Super 8 by Wyndham Watertown WI

Watertown

CNY493

CNY560 total

includes taxes & fees

Aug 19 - Aug 20

1 bedroom, desk, laptop workspace, blackout drapes

AmericInn by Wyndham Fort Atkinson

Fort Atkinson

CNY533

CNY589 total

includes taxes & fees

Aug 17 - Aug 18

Hypo-allergenic bedding available, desk, blackout drapes

Fairfield Inn & Suites by Marriott Madison East

Madison

CNY753

CNY870 total

includes taxes & fees

Aug 27 - Aug 28

Premier Single Room | Premium bedding, pillowtop beds, blackout drapes

Exclusive Suite | Premium bedding, pillowtop beds, blackout drapes

Cambridge Inn on Main

Cambridge

CNY1,027

CNY1,083 total

includes taxes & fees

Aug 17 - Aug 18

Paradise Suite, Jetted Tub, Valley View | Egyptian cotton sheets, premium bedding, down comforters

Shane Acres Country Inn

Juneau

CNY698

CNY737 total

includes taxes & fees

Aug 16 - Aug 17

In-room safe, desk, iron/ironing board, cribs (free)

Holiday Inn Express Hotel & Suites Fort Atkinson by IHG

Fort Atkinson

CNY708

CNY783 total

includes taxes & fees

Aug 23 - Aug 24

View all properties

Go beyond your typical stay in Waterloo

Pet friendly

Pool

Family friendly

Hot tub

Top landmarks in Waterloo

Holzhueter Farm State Park

6.0/10 (1 review)

Holzhueter Farm State Park is 4 mi (6.4 km) from central Waterloo, why not stop by during your stay.

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Learn more about Waterloo

The region around Waterloo is home to attractions such as Holzhueter Farm State Park and Little Amerricka.

See all hotels in Waterloo

A forested area with a stream and dense greenery.

Check out reviews of Waterloo hotels guests love

Madison Marriott South

10/10 Excellent

"Stayed two nights and had a wonderful experience. Clean and quiet. Would go back again when we are back in Madison."

Comfort Inn & Suites Madison East Interstate I-90

10/10 Excellent

"Stayed here a number of times when we come to this area. Nice hotel for an affordable price."

Comfort Suites Johnson Creek Conference Center

8/10 Good

"Interesting..... It`s in an odd out of the way place for a hotel/convention center. Isolated away from the freeway and out on the side of town far away from any other businesses. I seriously thought Google Maps was taking us on another wild goose chase. Once we arrived we were pleasanty surprised. It`s an older facility but in pretty good shape. Being out on the edge of town, it`s very quiet and peaceful! Our room was very nice but not what I reserved. I had reserved a king suite and instead it was two queens. That being said, the beds were awesome! Everything was clean other than the carpet. We only had three channels on the tv but were told the facility was in the process of switching from Spectrum to Directv. We did gain a few more channels the following evening. We only had one bath towel and I seriously think it was a hand towel. It was very small. There was no shampoo. The second day we went to the front desk and they gave us more towels and shampoo. We didn`t have breakfast at the hotel because we were on our way to an event which served food. There was lots of parking close to the room. All in all, we call it a good stay."

Best Western East Towne Suites

10/10 Excellent

"Hotel was completely booked. Was very surprised how quite it was being that full. Room was very clean and comfortable. Staff was very friendly and helpful. Will stay again."

Home2 Suites by Hilton Madison Central Alliant Energy Center

10/10 Excellent

"I travel often for work and this place is one of the nicest hotels I’ve stayed in. The rooms are large clean and they give you plenty of towels. Front desk staff was extremely helpful. I would definitely stay here again.!"

AmericInn by Wyndham Madison South

8/10 Good

"Every member of the staff was polite, kind and helpful. Well done"

DoubleTree by Hilton Madison East

10/10 Excellent

"Very clean and nice space! Lobby area was very hot and muggy and appeared to be having some AC issues. Overall great stay!"

Econo Lodge Madison East

8/10 Good

"For a basic stay, this is a good value."

The Dylin

10/10 Excellent

"Beautiful!"

Frequently asked questions

How much does a hotel room cost in Waterloo?

You can discover great hotels in Waterloo from CNY501 with properties to suit all budgets and needs. If you're looking for an affordable hotel in Waterloo that meets all of your requirements, just sort hotels by "Price: low to high" after applying your filters when searching on Hotels.com.

How can I find deals and earn rewards at Waterloo hotels?

Discover great deals on Waterloo hotel stays with Hotels.com. You can also look at hotel prices mid-week or during the low season to find off-peak deals. If you're up for a spontaneous trip, don't forget to check out our last-minute deals on Waterloo hotels.

Can I book Waterloo hotels with free cancellation?

To book a refundable Waterloo hotel on Hotels.com, just filter hotels by "Property cancellation options" and select "Fully refundable property". Many hotels offer free cancellation, so you can receive a refund if you need to cancel. Some hotels do require cancelling more than 24 hours before check-in, so double-check your booking beforehand.

What accommodations do travelers recommend in Waterloo?

Guests like Econo Lodge.

Can I book a refundable hotel in Waterloo?

If you need the flexibility to change your travel plans to Waterloo, most accommodations provide refundable* rates you can book. You can see these accommodations by searching our site and using the "fully refundable" filter to narrow down the results.

What will the weather in Waterloo be like during my vacation?

July and August are typically the warmest months in Waterloo when the average temp is 68°F. January and February are the coldest months when the average temperature is 25°F. June and April are the months with the most rain.

Why should I book my Waterloo hotel through Hotels.com?

There are lots of reasons to book your Waterloo trip with us: our free cancellations on selected hotels gives you flexibility, and with One Key™, our rewards program, you will be able to earn and use OneKeyCash™* on all eligible bookings such as hotels, car rentals, flights, vacation rentals and more on Hotels.com, Expedia and Vrbo.

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