Hotels in Yankton

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Check prices for these dates

Tonight

Aug 27 - Aug 28

Tomorrow

Aug 28 - Aug 29

This weekend

Aug 28 - Aug 30

Next weekend

Top 5 hotels in Yankton at a glance

Fairfield Inn & Suites by Marriott Yankton — 3-star hotel in Yankton. Guest rating: 9.4/10 — Exceptional.
Holiday Inn Express & Suites Yankton by IHG — 2.5-star hotel in Yankton. Guest rating: 9.2/10 — Wonderful.
Comfort Inn Yankton SD — 2.5-star hotel in Yankton. Guest rating: 8.8/10 — Excellent.
Best Western Kelly Inn — 2.5-star hotel in Yankton. Guest rating: 8.0/10 — Very Good.
Super 8 by Wyndham Yankton — 2-star hotel in Yankton. Guest rating: 7.6/10 — Good.

Where to stay in Yankton?

Properties are selected based on real traveler reviews and popularity among guests who’ve booked a night in Yankton on Hotels.com. These Yankton hotels consistently deliver on comfort, location and traveler experience. Last updated on August 27, 2026.

A modern living room with a fireplace, seating area, and large windows.

A patio with outdoor seating, stone wall, and large windows.

A restaurant with a long counter, booths, and high tables.

A Fairfield by Marriott hotel with a modern design, featuring a prominent entrance and a stone facade.

Fairfield Inn & Suites by Marriott Yankton

Yankton

CNY934

CNY1,029 total

includes taxes & fees

Sep 6 - Sep 7

A hotel room with a bed, a desk with a television, a chair, a lamp, and a window with curtains.

A Holiday Inn Express & Suites building with a covered entrance and a brick facade.

An indoor swimming pool with clear blue water, surrounded by white chairs and tables.

A hotel lobby with a fireplace, seating area, and a coffee station.

Holiday Inn Express & Suites Yankton by IHG

Yankton

CNY793

CNY876 total

includes taxes & fees

Sep 8 - Sep 9

A hotel lobby with a reception desk, seating area, and a large window with a view of a building.

A hotel room with two beds, a desk, a chair, and a framed picture on the wall.

A spa area with a hot tub, seating, and a view of the parking lot.

A hotel reception area with a long counter, coffee machines, and a television screen displaying a program.

Comfort Inn Yankton SD

Yankton

CNY756

CNY836 total

includes taxes & fees

Sep 7 - Sep 8

A lobby with a stone fireplace, leather seating, a bar area, and a staircase.

A restaurant with multiple dining areas, including booths and tables, with a bar area visible in the background.

A bar area with a long counter, multiple stools, and hanging glassware.

A Best Western hotel with a modern facade, large glass windows, and a well-lit entrance.

Best Western Kelly Inn

Yankton

CNY714

CNY789 total

includes taxes & fees

Sep 6 - Sep 7

A hotel room with two beds, a desk, a chair, a window with curtains, a wall-mounted TV, and a large wall art piece.

A multi-story hotel with a covered entrance, stone accents, and a parking lot.

A reception area with a counter, a mounted sign, a wall-mounted picture, a door, and a potted plant.

A bathroom with a sink, mirror, towel rack, toilet, and shower curtain.

Super 8 by Wyndham Yankton

Yankton

CNY524

CNY583 total

includes taxes & fees

Sep 1 - Sep 2

A hotel room with two beds, a desk, a chair, and a lamp.

A hotel room with a sofa, a television, a desk with a chair, a lamp, a microwave, a framed picture, and a fireplace.

A kitchen with wooden cabinets, a dining area with chairs, a refrigerator, and a microwave.

A living room with a brown leather sofa, a brown leather armchair, a round coffee table, a red doormat, a window with curtains, and an air conditioning unit.

Econo Lodge Inn & Suites Yankton

Yankton

CNY514

CNY572 total

includes taxes & fees

Sep 17 - Sep 18

A spacious kitchen with a large island, modern pendant lights, and a ceiling fan.

A modern kitchen with stainless steel appliances, dark wood cabinets, and a tiled floor.

A modern kitchen with dark cabinets, stainless steel appliances, and a large window.

Two people sitting on Adirondack chairs facing a lake, with picnic tables and benches in the background.

Lewis and Clark Resort

Yankton

CNY605

CNY639 total

includes taxes & fees

Sep 8 - Sep 9

A hotel with a covered outdoor area, multiple windows, and a stone pillar.

A hotel room with a bed, bedside lamps, a small desk, a microwave, and a kitchenette.

A hotel room with a bed, a desk with a chair, a television, a lamp, and a window with curtains.

A hotel lobby with a leather sofa, a patterned rug, a wooden cabinet, and a dining area with a table and chairs.

Best Western Vermillion Inn

Vermillion

CNY672

CNY744 total

includes taxes & fees

Aug 31 - Sep 1

A hotel room with a large bed, a separate bathroom with a bathtub, a desk with a television, and a view of trees through the window.

A reception desk with a flat-screen TV, pendant lights, and a potted plant.

A bar area with a long counter, multiple bar stools, a television mounted on the wall, and a wine rack with various bottles.

A living room with a stone fireplace, a flat-screen TV, and a patterned carpet.

Cobblestone Inn & Suites - Hartington

Hartington

CNY817

CNY947 total

includes taxes & fees

Sep 13 - Sep 14

A grand staircase with wooden railings and a red flag, leading to a room with a patterned ceiling and string lights.

A neatly made bed with a patterned bedspread and pillows, a bedside lamp, and a window with closed blinds.

A bedroom with a bed, a bedside table, a lamp, and a mirror.

A bed with a metal headboard, two pillows, a bedside table with a lamp, and a window with curtains.

The Historic Argo Hotel

Crofton

CNY1,180

CNY1,321 total

includes taxes & fees

Aug 28 - Aug 29

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A spacious kitchen with a large island, modern pendant lights, and a ceiling fan.

A modern kitchen with stainless steel appliances, dark wood cabinets, and a tiled floor.

A modern kitchen with dark cabinets, stainless steel appliances, and a large window.

Two people sitting on Adirondack chairs facing a lake, with picnic tables and benches in the background.

Lewis and Clark Resort

Yankton

CNY258 off

CNY592

per night

CNY626 total

includes taxes & fees

A hotel lobby with a reception desk, seating area, and a large window with a view of a building.

A hotel room with two beds, a desk, a chair, and a framed picture on the wall.

A spa area with a hot tub, seating, and a view of the parking lot.

A hotel reception area with a long counter, coffee machines, and a television screen displaying a program.

Comfort Inn Yankton SD

Yankton

CNY901

per night

CNY993 total

includes taxes & fees

A hotel room with two beds, a desk, a chair, a window with curtains, a wall-mounted TV, and a large wall art piece.

A multi-story hotel with a covered entrance, stone accents, and a parking lot.

A reception area with a counter, a mounted sign, a wall-mounted picture, a door, and a potted plant.

A bathroom with a sink, mirror, towel rack, toilet, and shower curtain.

Super 8 by Wyndham Yankton

Yankton

We have 1 left at

CNY600

per night

CNY666 total

includes taxes & fees

A lobby with a stone fireplace, leather seating, a bar area, and a staircase.

A restaurant with multiple dining areas, including booths and tables, with a bar area visible in the background.

A bar area with a long counter, multiple stools, and hanging glassware.

A Best Western hotel with a modern facade, large glass windows, and a well-lit entrance.

Best Western Kelly Inn

Yankton

We have 1 left at

CNY853

per night

CNY941 total

includes taxes & fees

A hotel room with a bed, a desk with a television, a chair, a lamp, and a window with curtains.

A Holiday Inn Express & Suites building with a covered entrance and a brick facade.

An indoor swimming pool with clear blue water, surrounded by white chairs and tables.

A hotel lobby with a fireplace, seating area, and a coffee station.

Holiday Inn Express & Suites Yankton by IHG

Yankton

We have 2 left at

CNY1,102

per night

CNY1,212 total

includes taxes & fees

A modern living room with a fireplace, seating area, and large windows.

A patio with outdoor seating, stone wall, and large windows.

A restaurant with a long counter, booths, and high tables.

A Fairfield by Marriott hotel with a modern design, featuring a prominent entrance and a stone facade.

Fairfield Inn & Suites by Marriott Yankton

Yankton

We have 1 left at

CNY1,136

per night

CNY1,248 total

includes taxes & fees

A hotel room with two beds, a desk, a chair, and a lamp.

A hotel room with a sofa, a television, a desk with a chair, a lamp, a microwave, a framed picture, and a fireplace.

A kitchen with wooden cabinets, a dining area with chairs, a refrigerator, and a microwave.

A living room with a brown leather sofa, a brown leather armchair, a round coffee table, a red doormat, a window with curtains, and an air conditioning unit.

Econo Lodge Inn & Suites Yankton

Yankton

We have 2 left at

CNY666

per night

CNY737 total

includes taxes & fees

A hotel room with two beds, a desk, a TV, a window with curtains, and a large wall painting.

A small kitchenette with a coffee machine, a toaster, and a microwave. There are two tables with chairs, a trash can, and a clock on the wall.

A modern bathroom with a sink, toilet, and shower.

A hotel room with two beds, a large framed picture on the wall, two bedside lamps, and a nightstand with a lamp.

Super 8 by Wyndham Yankton

Yankton

A hotel room with two beds, a desk, a chair, and a small sofa.

A swimming pool with a tiled deck, a changing room, and a small seating area.

Econo Lodge Inn & Suites Yankton, SD

Yankton

A spacious kitchen with a large island, modern pendant lights, and a ceiling fan.

A modern kitchen with stainless steel appliances, dark wood cabinets, and a tiled floor.

A modern kitchen with dark cabinets, stainless steel appliances, and a large window.

Two people sitting on Adirondack chairs facing a lake, with picnic tables and benches in the background.

Lewis and Clark Resort

Yankton

CNY407 off

CNY830

per night

CNY877 total

includes taxes & fees

A hotel room with two beds, a desk, a chair, a window with curtains, a wall-mounted TV, and a large wall art piece.

A multi-story hotel with a covered entrance, stone accents, and a parking lot.

A reception area with a counter, a mounted sign, a wall-mounted picture, a door, and a potted plant.

A bathroom with a sink, mirror, towel rack, toilet, and shower curtain.

Super 8 by Wyndham Yankton

Yankton

CNY800

per night

CNY883 total

includes taxes & fees

A hotel lobby with a reception desk, seating area, and a large window with a view of a building.

A hotel room with two beds, a desk, a chair, and a framed picture on the wall.

A spa area with a hot tub, seating, and a view of the parking lot.

A hotel reception area with a long counter, coffee machines, and a television screen displaying a program.

Comfort Inn Yankton SD

Yankton

CNY1,271

per night

CNY1,394 total

includes taxes & fees

A hotel room with two beds, a desk, a chair, and a lamp.

A hotel room with a sofa, a television, a desk with a chair, a lamp, a microwave, a framed picture, and a fireplace.

A kitchen with wooden cabinets, a dining area with chairs, a refrigerator, and a microwave.

A living room with a brown leather sofa, a brown leather armchair, a round coffee table, a red doormat, a window with curtains, and an air conditioning unit.

Econo Lodge Inn & Suites Yankton

Yankton

We have 1 left at

CNY807

per night

CNY890 total

includes taxes & fees

A hotel room with a bed, a desk with a television, a chair, a lamp, and a window with curtains.

A Holiday Inn Express & Suites building with a covered entrance and a brick facade.

An indoor swimming pool with clear blue water, surrounded by white chairs and tables.

A hotel lobby with a fireplace, seating area, and a coffee station.

Holiday Inn Express & Suites Yankton by IHG

Yankton

We have 4 left at

CNY1,539

per night

CNY1,687 total

includes taxes & fees

A lobby with a stone fireplace, leather seating, a bar area, and a staircase.

A restaurant with multiple dining areas, including booths and tables, with a bar area visible in the background.

A bar area with a long counter, multiple stools, and hanging glassware.

A Best Western hotel with a modern facade, large glass windows, and a well-lit entrance.

Best Western Kelly Inn

Yankton

We have 1 left at

CNY1,274

per night

CNY1,398 total

includes taxes & fees

A modern living room with a fireplace, seating area, and large windows.

A patio with outdoor seating, stone wall, and large windows.

A restaurant with a long counter, booths, and high tables.

A Fairfield by Marriott hotel with a modern design, featuring a prominent entrance and a stone facade.

Fairfield Inn & Suites by Marriott Yankton

Yankton

We have 2 left at

CNY1,674

per night

CNY1,833 total

includes taxes & fees

A hotel room with two beds, a desk, a TV, a window with curtains, and a large wall painting.

A small kitchenette with a coffee machine, a toaster, and a microwave. There are two tables with chairs, a trash can, and a clock on the wall.

A modern bathroom with a sink, toilet, and shower.

A hotel room with two beds, a large framed picture on the wall, two bedside lamps, and a nightstand with a lamp.

Super 8 by Wyndham Yankton

Yankton

A hotel room with two beds, a desk, a chair, and a small sofa.

A swimming pool with a tiled deck, a changing room, and a small seating area.

Econo Lodge Inn & Suites Yankton, SD

Yankton

A hotel lobby with a reception desk, seating area, and a large window with a view of a building.

A hotel room with two beds, a desk, a chair, and a framed picture on the wall.

A spa area with a hot tub, seating, and a view of the parking lot.

A hotel reception area with a long counter, coffee machines, and a television screen displaying a program.

Comfort Inn Yankton SD

Yankton

CNY823

per night

CNY1,816 total

includes taxes & fees

A hotel room with two beds, a desk, a chair, a window with curtains, a wall-mounted TV, and a large wall art piece.

A multi-story hotel with a covered entrance, stone accents, and a parking lot.

A reception area with a counter, a mounted sign, a wall-mounted picture, a door, and a potted plant.

A bathroom with a sink, mirror, towel rack, toilet, and shower curtain.

Super 8 by Wyndham Yankton

Yankton

We have 8 left at

CNY661

per night

CNY1,465 total

includes taxes & fees

A lobby with a stone fireplace, leather seating, a bar area, and a staircase.

A restaurant with multiple dining areas, including booths and tables, with a bar area visible in the background.

A bar area with a long counter, multiple stools, and hanging glassware.

A Best Western hotel with a modern facade, large glass windows, and a well-lit entrance.

Best Western Kelly Inn

Yankton

We have 8 left at

CNY879

per night

CNY1,938 total

includes taxes & fees

A hotel room with two beds, a desk, a chair, and a lamp.

A hotel room with a sofa, a television, a desk with a chair, a lamp, a microwave, a framed picture, and a fireplace.

A kitchen with wooden cabinets, a dining area with chairs, a refrigerator, and a microwave.

A living room with a brown leather sofa, a brown leather armchair, a round coffee table, a red doormat, a window with curtains, and an air conditioning unit.

Econo Lodge Inn & Suites Yankton

Yankton

We have 6 left at

CNY686

per night

CNY1,517 total

includes taxes & fees

A hotel room with a bed, a desk with a television, a chair, a lamp, and a window with curtains.

A Holiday Inn Express & Suites building with a covered entrance and a brick facade.

An indoor swimming pool with clear blue water, surrounded by white chairs and tables.

A hotel lobby with a fireplace, seating area, and a coffee station.

Holiday Inn Express & Suites Yankton by IHG

Yankton

We have 4 left at

CNY1,855

per night

CNY4,060 total

includes taxes & fees

A modern living room with a fireplace, seating area, and large windows.

A patio with outdoor seating, stone wall, and large windows.

A restaurant with a long counter, booths, and high tables.

A Fairfield by Marriott hotel with a modern design, featuring a prominent entrance and a stone facade.

Fairfield Inn & Suites by Marriott Yankton

Yankton

We have 1 left at

CNY1,909

per night

CNY4,177 total

includes taxes & fees

A balcony with a metal table and chairs, overlooking a park with trees and a lake.

A spacious living room with a sofa, a dining table, and a kitchen area in the background.

A spacious kitchen with wooden cabinets, a large island with bar stools, and a dining area with a sofa and coffee table.

A spacious kitchen with a dining area, wooden chairs, a large island, and a fireplace.

Downtown Yankton Apartment w/ Patio & River View!

Yankton

We have 1 left at

CNY1,264

per night

CNY3,865 total

includes taxes & fees

A hotel room with two beds, a desk, a TV, a window with curtains, and a large wall painting.

A small kitchenette with a coffee machine, a toaster, and a microwave. There are two tables with chairs, a trash can, and a clock on the wall.

A modern bathroom with a sink, toilet, and shower.

A hotel room with two beds, a large framed picture on the wall, two bedside lamps, and a nightstand with a lamp.

Super 8 by Wyndham Yankton

Yankton

A hotel room with two beds, a desk, a chair, and a small sofa.

A swimming pool with a tiled deck, a changing room, and a small seating area.

Econo Lodge Inn & Suites Yankton, SD

Yankton

A traditional living room with a fireplace, a wooden desk, a leather armchair, and a dining table.

A street view with buildings, cars, and a 'happy fall y'all' sign.

A room with a wooden dresser, a mirror, and a vanity with a chair.

A four-poster bed with a wooden headboard, a large mirror, and a framed picture on the wall.

Yankton Apt: 1 Mi to Mount Marty University!

Yankton

We have 1 left at

CNY1,257

per night

CNY3,269 total

includes taxes & fees

A stone building with a red awning labeled "The River Rose."

A wooden door with a plaque, a patterned wall, and three framed historical documents.

A living room with a fireplace, television, and a wooden cabinet.

A bathroom with a sink, mirror, and door leading to a living room with a chandelier.

Pet-friendly Apt: Walk to Missouri River!

Yankton

We have 1 left at

CNY1,465

per night

CNY3,722 total

includes taxes & fees

Go beyond your typical stay in Yankton

Pool

Family friendly

Pet friendly

Hot tub

Our prices for hotels in Yankton are cheapest in April

Top landmarks in Yankton

A cityscape with a prominent church steeple, a large brick building, and a bridge over a river.

Riverside Park

9.0/10 (71 reviews)

Riverside Park is worth a visit, located 0.7 mi (1.1 km) from central Yankton.

A church steeple, a river, and a bridge.

Mount Marty College

If you'd like to get a taste of Yankton student life, check out Mount Marty College, located 0.7 mi (1.1 km) from central Yankton.

Gavins Point Recreation Area

Gavins Point Recreation Area is 7.8 mi (12.6 km) from central Yankton, why not stop by during your stay. Want to stretch your legs some more? Head to Lewis and Clark Recreation Area and Tatanka State Wildlife Management Area, both nearby.

Lake Yankton

Lake Yankton is 4 mi (6.5 km) from central Yankton, why not stop by during your stay.

Missouri National Recreational River Headquarters

Missouri National Recreational River Headquarters is worth a visit, located 0.7 mi (1.1 km) from central Yankton.

Lewis & Clark Marina

Imagine strolling along Lewis & Clark Marina for some great waterfront pics. It's located 4.7 mi (7.6 km) from central Yankton.

Hillcrest Golf & Country Club

You might want to practice your swing at Hillcrest Golf & Country Club, a golf course located 2 mi (3.2 km) from central Yankton. If Hillcrest Golf & Country Club doesn't quite scratch your golfing itch, Fox Run Golf Course is also nearby.

Ridgeway Park

Ridgeway Park is worth a visit, located 2.4 mi (3.8 km) from central Yankton.

Learn more about Yankton

Yankton is applauded for its cultural attractions such as G.A.R. Hall and Riverside Park Amphitheatre. This family-friendly city has something for everyone including sights like Lake Yankton and Lewis and Clark Recreation Area.

See all hotels in Yankton

A large steel bridge spanning a river, surrounded by dense greenery and a fence.

Check out reviews of Yankton hotels guests love

Comfort Inn Yankton SD

Comfort Inn Yankton SD

10/10 Excellent

"The lobby staff was very accommodating to my toddler and myself we’ve enjoyed our stay"

Super 8 by Wyndham Yankton

Super 8 by Wyndham Yankton

8/10 Good

"It's a good motel with comfortable beds and quiet and peaceful, 5 minutes drive to town. They offer simple breakfast with hard boiled eggs, yogurt, bread, waffles, cereals."

Best Western Kelly Inn

Best Western Kelly Inn

10/10 Excellent

"Great place. I’ll be back"

Fairfield Inn & Suites by Marriott Yankton

Fairfield Inn & Suites by Marriott Yankton

10/10 Excellent

"Clean rooms, comfy beds. We had an issue with the TV and it was fixed immediately."

Lewis and Clark Resort

Lewis and Clark Resort

10/10 Excellent

"This condo was beautiful! Very clean and well maintained. Great location for everything we wanted to do in the Okoboji area. Would definitely stay here again."

Econo Lodge Inn & Suites Yankton

Econo Lodge Inn & Suites Yankton

8/10 Good

"Good and clean staff was not always around."

Frequently asked questions

How much does a hotel room cost in Yankton?

You can find top hotels in Yankton from CNY572 with options to suit your budget and needs. If you're after an affordable hotel in Yankton that meets all of your requirements, set your filters and then sort the results by "Price: low to high".

How can I find deals and earn rewards at Yankton hotels?

Discover great deals on Yankton hotel stays with Hotels.com. You can also look at hotel prices mid-week or during the low season to find off-peak deals. If you're up for a spontaneous trip, don't forget to check out our last-minute deals on Yankton hotels.

Can I book Yankton hotels with free cancellation?

In order to book a refundable Yankton hotel, simply filter hotels by "Property cancellation options" and select "Fully refundable property". Many hotels offer free cancellation, so you can receive a refund if you need to cancel. Some hotels do require cancelling more than 24 hours before check-in, so double-check your booking beforehand.

What are some of the best Yankton hotels with free parking?

If you're arriving by car, choosing a great Yankton hotel with free parking is a plus. Our travelers' favorites include:

Fairfield Inn & Suites by Marriott Yankton: A hotel with an average guest rating of 9.4 out of 10
Holiday Inn Express & Suites Yankton by IHG: A hotel with an average guest rating of 9.2
Comfort Inn Yankton SD: A hotel with an average guest rating of 8.8

What accommodations do travelers like in Yankton?

Guests like Comfort Inn Yankton SD, Super 8 by Wyndham Yankton and Best Western Kelly Inn.

Can I book refundable hotels in Yankton?

If you want the flexibility to change your travel plans to Yankton, most accommodations provide refundable* rates you can book. You can find these properties by searching our site and using the "fully refundable" filter to narrow the results down.

Where should I consider staying in Yankton if I want a reasonably priced accommodation?

Comfort Inn Yankton SD, Super 8 by Wyndham Yankton and Best Western Kelly Inn are a few accommodations you might want to consider that'll save you money.

Where can I stay in Yankton if I want a vacation rental instead of a traditional hotel?

If you're looking for a good alternative to a hotel, review our selection of 16 vacation homes. You can also consider one of the 20 apartments or 5 cottages.

What will the weather in Yankton be like during my vacation?

The warmest months in Yankton are usually July and August with an average temp of 72°F. January and February are the chilliest months when the average temp is 26°F. The rainiest months are June and May.

Why should I book my Yankton hotel through Hotels.com?

There are plenty of reasons to book your Yankton travel with us: our free cancellations on selected hotels gives you the flexibility you're looking for, and with One Key™, our rewards program, you will be able to earn and use OneKeyCash™* on all eligible bookings such as hotels, car rentals, flights, vacation rentals and more on Hotels.com, Expedia and Vrbo.

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