Hotels in Yankton

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Check prices for these dates

Tonight

Aug 29 - Aug 30

Tomorrow

Aug 30 - Aug 31

Next weekend

In two weeks

Sep 11 - Sep 13

Top 5 hotels in Yankton at a glance

Fairfield Inn & Suites by Marriott Yankton — 3-star hotel in Yankton. Guest rating: 9.4/10 — Exceptional.
Holiday Inn Express & Suites Yankton by IHG — 2.5-star hotel in Yankton. Guest rating: 9.2/10 — Wonderful.
Comfort Inn Yankton SD — 2.5-star hotel in Yankton. Guest rating: 8.8/10 — Excellent.
Best Western Kelly Inn — 2.5-star hotel in Yankton. Guest rating: 8.0/10 — Very Good.
Super 8 by Wyndham Yankton — 2-star hotel in Yankton. Guest rating: 7.6/10 — Good.

Where to stay in Yankton?

Properties are selected based on real traveler reviews and popularity among guests who’ve booked a night in Yankton on Hotels.com. These Yankton hotels consistently deliver on comfort, location and traveler experience. Last updated on August 29, 2026.

A modern living room with a fireplace, seating area, and large windows.

A Fairfield by Marriott hotel with a modern design, featuring a prominent entrance and a stone facade.

A modern reception area with wooden paneling, a reception desk, and a refrigerated display case.

A restaurant with a long counter, booths, and high tables.

Fairfield Inn & Suites by Marriott Yankton

Yankton

CNY934

CNY1,029 total

includes taxes & fees

Sep 7 - Sep 8

A Holiday Inn Express & Suites building with a covered entrance and a brick facade.

An indoor swimming pool with clear blue water, surrounded by white chairs and tables.

A hotel lobby with a fireplace, seating area, and a coffee station.

Holiday Inn Express & Suites Yankton by IHG

Yankton

CNY794

CNY877 total

includes taxes & fees

Sep 8 - Sep 9

A hotel lobby with a reception desk, seating area, and a large window with a view of a building.

A Comfort Inn hotel with a covered entrance, a parking lot, and a clear sky.

A spa area with a hot tub, seating, and a view of the parking lot.

A hotel reception area with a long counter, coffee machines, and a television screen displaying a program.

Comfort Inn Yankton SD

Yankton

CNY736

CNY813 total

includes taxes & fees

Sep 6 - Sep 7

A lobby with a stone fireplace, leather seating, a bar area, and a staircase.

A Best Western hotel with a modern facade, large glass windows, and a well-lit entrance.

A modern living room with a sofa set, a coffee table, and a rug.

A bar area with a long counter, multiple stools, and hanging glassware.

Best Western Kelly Inn

Yankton

CNY714

CNY789 total

includes taxes & fees

Sep 7 - Sep 8

A hotel room with two beds, a desk, a chair, a window with curtains, a wall-mounted TV, and a large wall art piece.

A reception area with a counter, a mounted sign, a wall-mounted picture, a door, and a potted plant.

A breakfast area with a coffee machine, a TV, and a clock on the wall.

A multi-story hotel with a covered entrance, stone accents, and a parking lot.

Super 8 by Wyndham Yankton

Yankton

CNY524

CNY583 total

includes taxes & fees

Sep 14 - Sep 15

A hotel room with two beds, a desk, a chair, and a lamp.

A kitchen with wooden cabinets, a dining area with chairs, a refrigerator, and a microwave.

A hotel room with a corner bathtub, a refrigerator, a microwave, a lamp, and a map on the wall.

A living room with a brown leather sofa, a brown leather armchair, a round coffee table, a red doormat, a window with curtains, and an air conditioning unit.

Econo Lodge Inn & Suites Yankton

Yankton

CNY514

CNY572 total

includes taxes & fees

Sep 20 - Sep 21

A spacious kitchen with a large island, modern pendant lights, and a ceiling fan.

A modern kitchen with stainless steel appliances, dark wood cabinets, and a tiled floor.

Two people sitting on Adirondack chairs facing a lake, with picnic tables and benches in the background.

A spacious room with wooden walls and ceiling, featuring a large chandelier, multiple windows, and a central seating area with tables and chairs.

Lewis and Clark Resort

Yankton

CNY565

CNY597 total

includes taxes & fees

Aug 30 - Aug 31

A hotel with a covered outdoor area, multiple windows, and a stone pillar.

A hotel lobby with a leather sofa, a patterned rug, a wooden cabinet, and a dining area with a table and chairs.

A hotel room with a bed, a desk with a chair, a television, a lamp, and a window with curtains.

A hotel room with a bed, bedside lamps, a small desk, a microwave, and a kitchenette.

Best Western Vermillion Inn

Vermillion

CNY673

CNY745 total

includes taxes & fees

Aug 31 - Sep 1

A hotel room with a large bed, a separate bathroom with a bathtub, a desk with a television, and a view of trees through the window.

A living room with a stone fireplace, a flat-screen TV, and a patterned carpet.

A reception desk with a flat-screen TV, pendant lights, and a potted plant.

A hotel lobby with a reception desk, a dining area with chairs and a table, and a kitchen area in the background.

Cobblestone Inn & Suites - Hartington

Hartington

CNY818

CNY948 total

includes taxes & fees

Sep 13 - Sep 14

A grand staircase with wooden railings and a red flag, leading to a room with a patterned ceiling and string lights.

A neatly made bed with a patterned bedspread and pillows, a bedside lamp, and a window with closed blinds.

A bed with a metal headboard, two pillows, a bedside table with a lamp, and a window with curtains.

A bedroom with a bed, bedside table, lamp, and a window with blinds.

The Historic Argo Hotel

Crofton

CNY1,179

CNY1,321 total

includes taxes & fees

Sep 11 - Sep 12

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A spacious kitchen with a large island, modern pendant lights, and a ceiling fan.

A modern kitchen with stainless steel appliances, dark wood cabinets, and a tiled floor.

Two people sitting on Adirondack chairs facing a lake, with picnic tables and benches in the background.

A spacious room with wooden walls and ceiling, featuring a large chandelier, multiple windows, and a central seating area with tables and chairs.

Lewis and Clark Resort

Yankton

CNY287 off

CNY565

per night

CNY597 total

includes taxes & fees

A hotel lobby with a reception desk, seating area, and a large window with a view of a building.

A Comfort Inn hotel with a covered entrance, a parking lot, and a clear sky.

A spa area with a hot tub, seating, and a view of the parking lot.

A hotel reception area with a long counter, coffee machines, and a television screen displaying a program.

Comfort Inn Yankton SD

Yankton

CNY886

per night

CNY976 total

includes taxes & fees

A lobby with a stone fireplace, leather seating, a bar area, and a staircase.

A Best Western hotel with a modern facade, large glass windows, and a well-lit entrance.

A modern living room with a sofa set, a coffee table, and a rug.

A bar area with a long counter, multiple stools, and hanging glassware.

Best Western Kelly Inn

Yankton

We have 1 left at

CNY793

per night

CNY875 total

includes taxes & fees

A hotel room with two beds, a desk, a chair, a window with curtains, a wall-mounted TV, and a large wall art piece.

A reception area with a counter, a mounted sign, a wall-mounted picture, a door, and a potted plant.

A breakfast area with a coffee machine, a TV, and a clock on the wall.

A multi-story hotel with a covered entrance, stone accents, and a parking lot.

Super 8 by Wyndham Yankton

Yankton

We have 7 left at

CNY601

per night

CNY666 total

includes taxes & fees

A hotel room with two beds, a desk, a chair, and a lamp.

A kitchen with wooden cabinets, a dining area with chairs, a refrigerator, and a microwave.

A hotel room with a corner bathtub, a refrigerator, a microwave, a lamp, and a map on the wall.

A living room with a brown leather sofa, a brown leather armchair, a round coffee table, a red doormat, a window with curtains, and an air conditioning unit.

Econo Lodge Inn & Suites Yankton

Yankton

We have 2 left at

CNY606

per night

CNY672 total

includes taxes & fees

A Holiday Inn Express & Suites building with a covered entrance and a brick facade.

An indoor swimming pool with clear blue water, surrounded by white chairs and tables.

A hotel lobby with a fireplace, seating area, and a coffee station.

Holiday Inn Express & Suites Yankton by IHG

Yankton

CNY1,070

per night

CNY1,176 total

includes taxes & fees

A modern living room with a fireplace, seating area, and large windows.

A Fairfield by Marriott hotel with a modern design, featuring a prominent entrance and a stone facade.

A modern reception area with wooden paneling, a reception desk, and a refrigerated display case.

A restaurant with a long counter, booths, and high tables.

Fairfield Inn & Suites by Marriott Yankton

Yankton

We have 1 left at

CNY1,070

per night

CNY1,176 total

includes taxes & fees

A hotel room with two beds, a desk, a TV, a window with curtains, and a large wall painting.

A reception area with a counter, a mounted horse racing poster, a framed welcome sign, and a plant on the counter.

A modern bathroom with a sink, toilet, and shower.

A hotel room with two beds, a large framed picture on the wall, two bedside lamps, and a nightstand with a lamp.

Super 8 by Wyndham Yankton

Yankton

A hotel room with two beds, a desk, a chair, and a small sofa.

A swimming pool with a tiled deck, a changing room, and a small seating area.

Econo Lodge Inn & Suites Yankton, SD

Yankton

A hotel lobby with a reception desk, seating area, and a large window with a view of a building.

A Comfort Inn hotel with a covered entrance, a parking lot, and a clear sky.

A spa area with a hot tub, seating, and a view of the parking lot.

A hotel reception area with a long counter, coffee machines, and a television screen displaying a program.

Comfort Inn Yankton SD

Yankton

We have 4 left at

CNY824

per night

CNY1,817 total

includes taxes & fees

A hotel room with two beds, a desk, a chair, and a lamp.

A kitchen with wooden cabinets, a dining area with chairs, a refrigerator, and a microwave.

A hotel room with a corner bathtub, a refrigerator, a microwave, a lamp, and a map on the wall.

A living room with a brown leather sofa, a brown leather armchair, a round coffee table, a red doormat, a window with curtains, and an air conditioning unit.

Econo Lodge Inn & Suites Yankton

Yankton

We have 2 left at

CNY686

per night

CNY1,519 total

includes taxes & fees

A hotel room with two beds, a desk, a chair, a window with curtains, a wall-mounted TV, and a large wall art piece.

A reception area with a counter, a mounted sign, a wall-mounted picture, a door, and a potted plant.

A breakfast area with a coffee machine, a TV, and a clock on the wall.

A multi-story hotel with a covered entrance, stone accents, and a parking lot.

Super 8 by Wyndham Yankton

Yankton

We have 8 left at

CNY662

per night

CNY1,466 total

includes taxes & fees

A lobby with a stone fireplace, leather seating, a bar area, and a staircase.

A Best Western hotel with a modern facade, large glass windows, and a well-lit entrance.

A modern living room with a sofa set, a coffee table, and a rug.

A bar area with a long counter, multiple stools, and hanging glassware.

Best Western Kelly Inn

Yankton

We have 5 left at

CNY977

per night

CNY2,150 total

includes taxes & fees

A Holiday Inn Express & Suites building with a covered entrance and a brick facade.

An indoor swimming pool with clear blue water, surrounded by white chairs and tables.

A hotel lobby with a fireplace, seating area, and a coffee station.

Holiday Inn Express & Suites Yankton by IHG

Yankton

We have 3 left at

CNY1,857

per night

CNY4,064 total

includes taxes & fees

A modern living room with a fireplace, seating area, and large windows.

A Fairfield by Marriott hotel with a modern design, featuring a prominent entrance and a stone facade.

A modern reception area with wooden paneling, a reception desk, and a refrigerated display case.

A restaurant with a long counter, booths, and high tables.

Fairfield Inn & Suites by Marriott Yankton

Yankton

We have 2 left at

CNY1,911

per night

CNY4,182 total

includes taxes & fees

A balcony with a metal table and chairs, overlooking a park with trees and a lake.

A spacious kitchen with wooden cabinets, a large island with bar stools, and a dining area with a sofa and coffee table.

A spacious kitchen with a dining area, wooden chairs, a large island, and a fireplace.

A spacious living room with a sofa, a dining table, and a kitchen area in the background.

Downtown Yankton Apartment w/ Patio & River View!

Yankton

We have 1 left at

CNY1,268

per night

CNY3,876 total

includes taxes & fees

A hotel room with two beds, a desk, a TV, a window with curtains, and a large wall painting.

A reception area with a counter, a mounted horse racing poster, a framed welcome sign, and a plant on the counter.

A modern bathroom with a sink, toilet, and shower.

A hotel room with two beds, a large framed picture on the wall, two bedside lamps, and a nightstand with a lamp.

Super 8 by Wyndham Yankton

Yankton

A hotel room with two beds, a desk, a chair, and a small sofa.

A swimming pool with a tiled deck, a changing room, and a small seating area.

Econo Lodge Inn & Suites Yankton, SD

Yankton

A traditional living room with a fireplace, a wooden desk, a leather armchair, and a dining table.

A street view with buildings, cars, and a 'happy fall y'all' sign.

A living room with a sofa, wooden furniture, a chandelier, and a fireplace.

A room with a wooden dresser, a mirror, and a vanity with a chair.

Yankton Apt: 1 Mi to Mount Marty University!

Yankton

We have 1 left at

CNY1,258

per night

CNY3,272 total

includes taxes & fees

A stone building with a red awning labeled "The River Rose."

A wooden door with a plaque, a patterned wall, and three framed historical documents.

A cozy living room with a sofa, armchairs, a wooden coffee table, and a chandelier.

A living room with a fireplace, television, and a wooden cabinet.

Pet-friendly Apt: Walk to Missouri River!

Yankton

We have 1 left at

CNY1,467

per night

CNY3,726 total

includes taxes & fees

You can also stay at hotels with a pool in Yankton

A modern living room with a fireplace, seating area, and large windows.

A Fairfield by Marriott hotel with a modern design, featuring a prominent entrance and a stone facade.

A modern reception area with wooden paneling, a reception desk, and a refrigerated display case.

A restaurant with a long counter, booths, and high tables.

Fairfield Inn & Suites by Marriott Yankton

Yankton

CNY934

CNY1,029 total

includes taxes & fees

Sep 7 - Sep 8

A Holiday Inn Express & Suites building with a covered entrance and a brick facade.

An indoor swimming pool with clear blue water, surrounded by white chairs and tables.

A hotel lobby with a fireplace, seating area, and a coffee station.

Holiday Inn Express & Suites Yankton by IHG

Yankton

CNY794

CNY877 total

includes taxes & fees

Sep 8 - Sep 9

A lobby with a stone fireplace, leather seating, a bar area, and a staircase.

A Best Western hotel with a modern facade, large glass windows, and a well-lit entrance.

A modern living room with a sofa set, a coffee table, and a rug.

A bar area with a long counter, multiple stools, and hanging glassware.

Best Western Kelly Inn

Yankton

CNY714

CNY789 total

includes taxes & fees

Sep 7 - Sep 8

A spacious kitchen with a large island, modern pendant lights, and a ceiling fan.

A modern kitchen with stainless steel appliances, dark wood cabinets, and a tiled floor.

Two people sitting on Adirondack chairs facing a lake, with picnic tables and benches in the background.

A spacious room with wooden walls and ceiling, featuring a large chandelier, multiple windows, and a central seating area with tables and chairs.

Lewis and Clark Resort

Yankton

CNY565

CNY597 total

includes taxes & fees

Aug 30 - Aug 31

A hotel room with two beds, a desk, a chair, and a lamp.

A kitchen with wooden cabinets, a dining area with chairs, a refrigerator, and a microwave.

A hotel room with a corner bathtub, a refrigerator, a microwave, a lamp, and a map on the wall.

A living room with a brown leather sofa, a brown leather armchair, a round coffee table, a red doormat, a window with curtains, and an air conditioning unit.

Econo Lodge Inn & Suites Yankton

Yankton

CNY514

CNY572 total

includes taxes & fees

Sep 20 - Sep 21

Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

View all properties

Go beyond your typical stay in Yankton

Pet friendly

Family friendly

Our prices for hotels in Yankton are cheapest in April

Top landmarks in Yankton

A cityscape with a prominent church steeple, a large brick building, and a bridge over a river.

Riverside Park

9.0/10 (71 reviews)

Riverside Park is worth a visit, located 0.7 mi (1.1 km) from central Yankton.

A church steeple, a river, and a bridge.

Mount Marty College

If you'd like to get a taste of Yankton student life, check out Mount Marty College, located 0.7 mi (1.1 km) from central Yankton.

Gavins Point Recreation Area

Gavins Point Recreation Area is 7.8 mi (12.6 km) from central Yankton, why not stop by during your stay. Want to stretch your legs some more? Head to Lewis and Clark Recreation Area and Tatanka State Wildlife Management Area, both nearby.

Lake Yankton

Lake Yankton is 4 mi (6.5 km) from central Yankton, why not stop by during your stay.

Missouri National Recreational River Headquarters

Missouri National Recreational River Headquarters is worth a visit, located 0.7 mi (1.1 km) from central Yankton.

Lewis & Clark Marina

Imagine strolling along Lewis & Clark Marina for some great waterfront pics. It's located 4.7 mi (7.6 km) from central Yankton.

Hillcrest Golf & Country Club

You might want to practice your swing at Hillcrest Golf & Country Club, a golf course located 2 mi (3.2 km) from central Yankton. If Hillcrest Golf & Country Club doesn't quite scratch your golfing itch, Fox Run Golf Course is also nearby.

Ridgeway Park

Ridgeway Park is worth a visit, located 2.4 mi (3.8 km) from central Yankton.

Learn more about Yankton

Yankton is applauded for its cultural attractions such as G.A.R. Hall and Riverside Park Amphitheatre. This family-friendly city has something for everyone including sights like Lake Yankton and Lewis and Clark Recreation Area.

See all hotels in Yankton

A large steel bridge spanning a river, surrounded by dense greenery and a fence.

Check out reviews of Yankton hotels guests love

Super 8 by Wyndham Yankton

Super 8 by Wyndham Yankton

8/10 Good

"It's a good motel with comfortable beds and quiet and peaceful, 5 minutes drive to town. They offer simple breakfast with hard boiled eggs, yogurt, bread, waffles, cereals."

Best Western Kelly Inn

Best Western Kelly Inn

10/10 Excellent

"Great place. I’ll be back"

Lewis and Clark Resort

Lewis and Clark Resort

10/10 Excellent

"This condo was beautiful! Very clean and well maintained. Great location for everything we wanted to do in the Okoboji area. Would definitely stay here again."

Econo Lodge Inn & Suites Yankton

Econo Lodge Inn & Suites Yankton

8/10 Good

"Good and clean staff was not always around."

Frequently asked questions

How much does a hotel room cost in Yankton?

You can find top hotels in Yankton from CNY572 with options to suit your budget and needs. If you're after an affordable hotel in Yankton that meets all of your requirements, set your filters and then sort the results by "Price: low to high".

How can I find deals and earn rewards at Yankton hotels?

Discover great deals on Yankton hotel stays with Hotels.com. You can also look at hotel prices mid-week or during the low season to find off-peak deals. If you're up for a spontaneous trip, don't forget to check out our last-minute deals on Yankton hotels.

Can I book Yankton hotels with free cancellation?

In order to book a refundable Yankton hotel, simply filter hotels by "Property cancellation options" and select "Fully refundable property". Many hotels offer free cancellation, so you can receive a refund if you need to cancel. Some hotels do require cancelling more than 24 hours before check-in, so double-check your booking beforehand.

What are some of the best Yankton hotels with free parking?

If you're arriving by car, choosing a great Yankton hotel with free parking is a plus. Our travelers' favorites include:

Fairfield Inn & Suites by Marriott Yankton: A hotel with an average guest rating of 9.4 out of 10
Holiday Inn Express & Suites Yankton by IHG: A hotel with an average guest rating of 9.2
Comfort Inn Yankton SD: A hotel with an average guest rating of 8.8

What accommodations do travelers like in Yankton?

Guests like Comfort Inn Yankton SD, Super 8 by Wyndham Yankton and Best Western Kelly Inn.

Can I book refundable hotels in Yankton?

If you want the flexibility to change your travel plans to Yankton, most accommodations provide refundable* rates you can book. You can find these properties by searching our site and using the "fully refundable" filter to narrow the results down.

Where should I consider staying in Yankton if I want a reasonably priced accommodation?

Comfort Inn Yankton SD, Super 8 by Wyndham Yankton and Best Western Kelly Inn are a few accommodations you might want to consider that'll save you money.

Where can I stay in Yankton if I want a vacation rental instead of a traditional hotel?

If you're looking for a good alternative to a hotel, review our selection of 16 vacation homes. You can also consider one of the 20 apartments or 5 cottages.

What will the weather in Yankton be like during my vacation?

The warmest months in Yankton are usually July and August with an average temp of 72°F. January and February are the chilliest months when the average temp is 26°F. The rainiest months are June and May.

Why should I book my Yankton hotel through Hotels.com?

There are plenty of reasons to book your Yankton travel with us: our free cancellations on selected hotels gives you the flexibility you're looking for, and with One Key™, our rewards program, you will be able to earn and use OneKeyCash™* on all eligible bookings such as hotels, car rentals, flights, vacation rentals and more on Hotels.com, Expedia and Vrbo.

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